Tag Archives: nextflow

Bioinformatics Frameworks Part 5: Cromwell and WDL

off

Recently I visited the DTL Programmers Meeting, where I had a discussion with members of the SASC bioinformatics development group. For them, bioinformatics pipelines are more about scalibilty and manageablity, not about user-friendliness or readability. They opted for Cromwell, a framework language maintained by the Broad Institute.

Continue Reading...

BioCentric Github Repository

off

BioCentric is all about creating the bridge between high level computational capabilities and real biological research.
To make this possible and provide solutions to reseachers at large, we started a Github repository.

Continue Reading...

Bioinformatics Frameworks Part 4: Nextflow

off

One of the biggest changes within the field of bioinformatics is the rise of the framework.  In part four, I will focus on Nextflow, the framework build for scaling.

Continue Reading...