Recently I visited the DTL Programmers Meeting, where I had a discussion with members of the SASC bioinformatics development group. For them, bioinformatics pipelines are more about scalibilty and manageablity, not about user-friendliness or readability. They opted for Cromwell, a framework language maintained by the Broad Institute.
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BioCentric is all about creating the bridge between high level computational capabilities and real biological research.
To make this possible and provide solutions to reseachers at large, we started a Github repository.
One of the biggest changes within the field of bioinformatics is the rise of the framework. In part four, I will focus on Nextflow, the framework build for scaling.
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